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GR0V Shell
GR0V shell
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import os
from os.path import join
import sys
import numpy as np
from numpy.testing import (assert_equal, assert_allclose, assert_array_equal,
assert_raises)
import pytest
from numpy.random import (
Generator, MT19937, PCG64, PCG64DXSM, Philox, RandomState, SeedSequence,
SFC64, default_rng
)
from numpy.random._common import interface
try:
import cffi # noqa: F401
MISSING_CFFI = False
except ImportError:
MISSING_CFFI = True
try:
import ctypes # noqa: F401
MISSING_CTYPES = False
except ImportError:
MISSING_CTYPES = False
if sys.flags.optimize > 1:
# no docstrings present to inspect when PYTHONOPTIMIZE/Py_OptimizeFlag > 1
# cffi cannot succeed
MISSING_CFFI = True
pwd = os.path.dirname(os.path.abspath(__file__))
def assert_state_equal(actual, target):
for key in actual:
if isinstance(actual[key], dict):
assert_state_equal(actual[key], target[key])
elif isinstance(actual[key], np.ndarray):
assert_array_equal(actual[key], target[key])
else:
assert actual[key] == target[key]
def uint32_to_float32(u):
return ((u >> np.uint32(8)) * (1.0 / 2**24)).astype(np.float32)
def uniform32_from_uint64(x):
x = np.uint64(x)
upper = np.array(x >> np.uint64(32), dtype=np.uint32)
lower = np.uint64(0xffffffff)
lower = np.array(x & lower, dtype=np.uint32)
joined = np.column_stack([lower, upper]).ravel()
return uint32_to_float32(joined)
def uniform32_from_uint53(x):
x = np.uint64(x) >> np.uint64(16)
x = np.uint32(x & np.uint64(0xffffffff))
return uint32_to_float32(x)
def uniform32_from_uint32(x):
return uint32_to_float32(x)
def uniform32_from_uint(x, bits):
if bits == 64:
return uniform32_from_uint64(x)
elif bits == 53:
return uniform32_from_uint53(x)
elif bits == 32:
return uniform32_from_uint32(x)
else:
raise NotImplementedError
def uniform_from_uint(x, bits):
if bits in (64, 63, 53):
return uniform_from_uint64(x)
elif bits == 32:
return uniform_from_uint32(x)
def uniform_from_uint64(x):
return (x >> np.uint64(11)) * (1.0 / 9007199254740992.0)
def uniform_from_uint32(x):
out = np.empty(len(x) // 2)
for i in range(0, len(x), 2):
a = x[i] >> 5
b = x[i + 1] >> 6
out[i // 2] = (a * 67108864.0 + b) / 9007199254740992.0
return out
def uniform_from_dsfmt(x):
return x.view(np.double) - 1.0
def gauss_from_uint(x, n, bits):
if bits in (64, 63):
doubles = uniform_from_uint64(x)
elif bits == 32:
doubles = uniform_from_uint32(x)
else: # bits == 'dsfmt'
doubles = uniform_from_dsfmt(x)
gauss = []
loc = 0
x1 = x2 = 0.0
while len(gauss) < n:
r2 = 2
while r2 >= 1.0 or r2 == 0.0:
x1 = 2.0 * doubles[loc] - 1.0
x2 = 2.0 * doubles[loc + 1] - 1.0
r2 = x1 * x1 + x2 * x2
loc += 2
f = np.sqrt(-2.0 * np.log(r2) / r2)
gauss.append(f * x2)
gauss.append(f * x1)
return gauss[:n]
def test_seedsequence():
from numpy.random.bit_generator import (ISeedSequence,
ISpawnableSeedSequence,
SeedlessSeedSequence)
s1 = SeedSequence(range(10), spawn_key=(1, 2), pool_size=6)
s1.spawn(10)
s2 = SeedSequence(**s1.state)
assert_equal(s1.state, s2.state)
assert_equal(s1.n_children_spawned, s2.n_children_spawned)
# The interfaces cannot be instantiated themselves.
assert_raises(TypeError, ISeedSequence)
assert_raises(TypeError, ISpawnableSeedSequence)
dummy = SeedlessSeedSequence()
assert_raises(NotImplementedError, dummy.generate_state, 10)
assert len(dummy.spawn(10)) == 10
def test_generator_spawning():
""" Test spawning new generators and bit_generators directly.
"""
rng = np.random.default_rng()
seq = rng.bit_generator.seed_seq
new_ss = seq.spawn(5)
expected_keys = [seq.spawn_key + (i,) for i in range(5)]
assert [c.spawn_key for c in new_ss] == expected_keys
new_bgs = rng.bit_generator.spawn(5)
expected_keys = [seq.spawn_key + (i,) for i in range(5, 10)]
assert [bg.seed_seq.spawn_key for bg in new_bgs] == expected_keys
new_rngs = rng.spawn(5)
expected_keys = [seq.spawn_key + (i,) for i in range(10, 15)]
found_keys = [rng.bit_generator.seed_seq.spawn_key for rng in new_rngs]
assert found_keys == expected_keys
# Sanity check that streams are actually different:
assert new_rngs[0].uniform() != new_rngs[1].uniform()
def test_non_spawnable():
from numpy.random.bit_generator import ISeedSequence
class FakeSeedSequence:
def generate_state(self, n_words, dtype=np.uint32):
return np.zeros(n_words, dtype=dtype)
ISeedSequence.register(FakeSeedSequence)
rng = np.random.default_rng(FakeSeedSequence())
with pytest.raises(TypeError, match="The underlying SeedSequence"):
rng.spawn(5)
with pytest.raises(TypeError, match="The underlying SeedSequence"):
rng.bit_generator.spawn(5)
class Base:
dtype = np.uint64
data2 = data1 = {}
@classmethod
def setup_class(cls):
cls.bit_generator = PCG64
cls.bits = 64
cls.dtype = np.uint64
cls.seed_error_type = TypeError
cls.invalid_init_types = []
cls.invalid_init_values = []
@classmethod
def _read_csv(cls, filename):
with open(filename) as csv:
seed = csv.readline()
seed = seed.split(',')
seed = [int(s.strip(), 0) for s in seed[1:]]
data = []
for line in csv:
data.append(int(line.split(',')[-1].strip(), 0))
return {'seed': seed, 'data': np.array(data, dtype=cls.dtype)}
def test_raw(self):
bit_generator = self.bit_generator(*self.data1['seed'])
uints = bit_generator.random_raw(1000)
assert_equal(uints, self.data1['data'])
bit_generator = self.bit_generator(*self.data1['seed'])
uints = bit_generator.random_raw()
assert_equal(uints, self.data1['data'][0])
bit_generator = self.bit_generator(*self.data2['seed'])
uints = bit_generator.random_raw(1000)
assert_equal(uints, self.data2['data'])
def test_random_raw(self):
bit_generator = self.bit_generator(*self.data1['seed'])
uints = bit_generator.random_raw(output=False)
assert uints is None
uints = bit_generator.random_raw(1000, output=False)
assert uints is None
def test_gauss_inv(self):
n = 25
rs = RandomState(self.bit_generator(*self.data1['seed']))
gauss = rs.standard_normal(n)
assert_allclose(gauss,
gauss_from_uint(self.data1['data'], n, self.bits))
rs = RandomState(self.bit_generator(*self.data2['seed']))
gauss = rs.standard_normal(25)
assert_allclose(gauss,
gauss_from_uint(self.data2['data'], n, self.bits))
def test_uniform_double(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
vals = uniform_from_uint(self.data1['data'], self.bits)
uniforms = rs.random(len(vals))
assert_allclose(uniforms, vals)
assert_equal(uniforms.dtype, np.float64)
rs = Generator(self.bit_generator(*self.data2['seed']))
vals = uniform_from_uint(self.data2['data'], self.bits)
uniforms = rs.random(len(vals))
assert_allclose(uniforms, vals)
assert_equal(uniforms.dtype, np.float64)
def test_uniform_float(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
vals = uniform32_from_uint(self.data1['data'], self.bits)
uniforms = rs.random(len(vals), dtype=np.float32)
assert_allclose(uniforms, vals)
assert_equal(uniforms.dtype, np.float32)
rs = Generator(self.bit_generator(*self.data2['seed']))
vals = uniform32_from_uint(self.data2['data'], self.bits)
uniforms = rs.random(len(vals), dtype=np.float32)
assert_allclose(uniforms, vals)
assert_equal(uniforms.dtype, np.float32)
def test_repr(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
assert 'Generator' in repr(rs)
assert f'{id(rs):#x}'.upper().replace('X', 'x') in repr(rs)
def test_str(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
assert 'Generator' in str(rs)
assert str(self.bit_generator.__name__) in str(rs)
assert f'{id(rs):#x}'.upper().replace('X', 'x') not in str(rs)
def test_pickle(self):
import pickle
bit_generator = self.bit_generator(*self.data1['seed'])
state = bit_generator.state
bitgen_pkl = pickle.dumps(bit_generator)
reloaded = pickle.loads(bitgen_pkl)
reloaded_state = reloaded.state
assert_array_equal(Generator(bit_generator).standard_normal(1000),
Generator(reloaded).standard_normal(1000))
assert bit_generator is not reloaded
assert_state_equal(reloaded_state, state)
ss = SeedSequence(100)
aa = pickle.loads(pickle.dumps(ss))
assert_equal(ss.state, aa.state)
def test_invalid_state_type(self):
bit_generator = self.bit_generator(*self.data1['seed'])
with pytest.raises(TypeError):
bit_generator.state = {'1'}
def test_invalid_state_value(self):
bit_generator = self.bit_generator(*self.data1['seed'])
state = bit_generator.state
state['bit_generator'] = 'otherBitGenerator'
with pytest.raises(ValueError):
bit_generator.state = state
def test_invalid_init_type(self):
bit_generator = self.bit_generator
for st in self.invalid_init_types:
with pytest.raises(TypeError):
bit_generator(*st)
def test_invalid_init_values(self):
bit_generator = self.bit_generator
for st in self.invalid_init_values:
with pytest.raises((ValueError, OverflowError)):
bit_generator(*st)
def test_benchmark(self):
bit_generator = self.bit_generator(*self.data1['seed'])
bit_generator._benchmark(1)
bit_generator._benchmark(1, 'double')
with pytest.raises(ValueError):
bit_generator._benchmark(1, 'int32')
@pytest.mark.skipif(MISSING_CFFI, reason='cffi not available')
def test_cffi(self):
bit_generator = self.bit_generator(*self.data1['seed'])
cffi_interface = bit_generator.cffi
assert isinstance(cffi_interface, interface)
other_cffi_interface = bit_generator.cffi
assert other_cffi_interface is cffi_interface
@pytest.mark.skipif(MISSING_CTYPES, reason='ctypes not available')
def test_ctypes(self):
bit_generator = self.bit_generator(*self.data1['seed'])
ctypes_interface = bit_generator.ctypes
assert isinstance(ctypes_interface, interface)
other_ctypes_interface = bit_generator.ctypes
assert other_ctypes_interface is ctypes_interface
def test_getstate(self):
bit_generator = self.bit_generator(*self.data1['seed'])
state = bit_generator.state
alt_state = bit_generator.__getstate__()
assert_state_equal(state, alt_state)
class TestPhilox(Base):
@classmethod
def setup_class(cls):
cls.bit_generator = Philox
cls.bits = 64
cls.dtype = np.uint64
cls.data1 = cls._read_csv(
join(pwd, './data/philox-testset-1.csv'))
cls.data2 = cls._read_csv(
join(pwd, './data/philox-testset-2.csv'))
cls.seed_error_type = TypeError
cls.invalid_init_types = []
cls.invalid_init_values = [(1, None, 1), (-1,), (None, None, 2 ** 257 + 1)]
def test_set_key(self):
bit_generator = self.bit_generator(*self.data1['seed'])
state = bit_generator.state
keyed = self.bit_generator(counter=state['state']['counter'],
key=state['state']['key'])
assert_state_equal(bit_generator.state, keyed.state)
class TestPCG64(Base):
@classmethod
def setup_class(cls):
cls.bit_generator = PCG64
cls.bits = 64
cls.dtype = np.uint64
cls.data1 = cls._read_csv(join(pwd, './data/pcg64-testset-1.csv'))
cls.data2 = cls._read_csv(join(pwd, './data/pcg64-testset-2.csv'))
cls.seed_error_type = (ValueError, TypeError)
cls.invalid_init_types = [(3.2,), ([None],), (1, None)]
cls.invalid_init_values = [(-1,)]
def test_advance_symmetry(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
state = rs.bit_generator.state
step = -0x9e3779b97f4a7c150000000000000000
rs.bit_generator.advance(step)
val_neg = rs.integers(10)
rs.bit_generator.state = state
rs.bit_generator.advance(2**128 + step)
val_pos = rs.integers(10)
rs.bit_generator.state = state
rs.bit_generator.advance(10 * 2**128 + step)
val_big = rs.integers(10)
assert val_neg == val_pos
assert val_big == val_pos
def test_advange_large(self):
rs = Generator(self.bit_generator(38219308213743))
pcg = rs.bit_generator
state = pcg.state["state"]
initial_state = 287608843259529770491897792873167516365
assert state["state"] == initial_state
pcg.advance(sum(2**i for i in (96, 64, 32, 16, 8, 4, 2, 1)))
state = pcg.state["state"]
advanced_state = 135275564607035429730177404003164635391
assert state["state"] == advanced_state
class TestPCG64DXSM(Base):
@classmethod
def setup_class(cls):
cls.bit_generator = PCG64DXSM
cls.bits = 64
cls.dtype = np.uint64
cls.data1 = cls._read_csv(join(pwd, './data/pcg64dxsm-testset-1.csv'))
cls.data2 = cls._read_csv(join(pwd, './data/pcg64dxsm-testset-2.csv'))
cls.seed_error_type = (ValueError, TypeError)
cls.invalid_init_types = [(3.2,), ([None],), (1, None)]
cls.invalid_init_values = [(-1,)]
def test_advance_symmetry(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
state = rs.bit_generator.state
step = -0x9e3779b97f4a7c150000000000000000
rs.bit_generator.advance(step)
val_neg = rs.integers(10)
rs.bit_generator.state = state
rs.bit_generator.advance(2**128 + step)
val_pos = rs.integers(10)
rs.bit_generator.state = state
rs.bit_generator.advance(10 * 2**128 + step)
val_big = rs.integers(10)
assert val_neg == val_pos
assert val_big == val_pos
def test_advange_large(self):
rs = Generator(self.bit_generator(38219308213743))
pcg = rs.bit_generator
state = pcg.state
initial_state = 287608843259529770491897792873167516365
assert state["state"]["state"] == initial_state
pcg.advance(sum(2**i for i in (96, 64, 32, 16, 8, 4, 2, 1)))
state = pcg.state["state"]
advanced_state = 277778083536782149546677086420637664879
assert state["state"] == advanced_state
class TestMT19937(Base):
@classmethod
def setup_class(cls):
cls.bit_generator = MT19937
cls.bits = 32
cls.dtype = np.uint32
cls.data1 = cls._read_csv(join(pwd, './data/mt19937-testset-1.csv'))
cls.data2 = cls._read_csv(join(pwd, './data/mt19937-testset-2.csv'))
cls.seed_error_type = ValueError
cls.invalid_init_types = []
cls.invalid_init_values = [(-1,)]
def test_seed_float_array(self):
assert_raises(TypeError, self.bit_generator, np.array([np.pi]))
assert_raises(TypeError, self.bit_generator, np.array([-np.pi]))
assert_raises(TypeError, self.bit_generator, np.array([np.pi, -np.pi]))
assert_raises(TypeError, self.bit_generator, np.array([0, np.pi]))
assert_raises(TypeError, self.bit_generator, [np.pi])
assert_raises(TypeError, self.bit_generator, [0, np.pi])
def test_state_tuple(self):
rs = Generator(self.bit_generator(*self.data1['seed']))
bit_generator = rs.bit_generator
state = bit_generator.state
desired = rs.integers(2 ** 16)
tup = (state['bit_generator'], state['state']['key'],
state['state']['pos'])
bit_generator.state = tup
actual = rs.integers(2 ** 16)
assert_equal(actual, desired)
tup = tup + (0, 0.0)
bit_generator.state = tup
actual = rs.integers(2 ** 16)
assert_equal(actual, desired)
class TestSFC64(Base):
@classmethod
def setup_class(cls):
cls.bit_generator = SFC64
cls.bits = 64
cls.dtype = np.uint64
cls.data1 = cls._read_csv(
join(pwd, './data/sfc64-testset-1.csv'))
cls.data2 = cls._read_csv(
join(pwd, './data/sfc64-testset-2.csv'))
cls.seed_error_type = (ValueError, TypeError)
cls.invalid_init_types = [(3.2,), ([None],), (1, None)]
cls.invalid_init_values = [(-1,)]
class TestDefaultRNG:
def test_seed(self):
for args in [(), (None,), (1234,), ([1234, 5678],)]:
rg = default_rng(*args)
assert isinstance(rg.bit_generator, PCG64)
def test_passthrough(self):
bg = Philox()
rg = default_rng(bg)
assert rg.bit_generator is bg
rg2 = default_rng(rg)
assert rg2 is rg
assert rg2.bit_generator is bg
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